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Sample requirements

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  • Samples may be submitted on Tuesdays and Wednesdays only. Samples that will be received on Thursdays and Fridays will be considered submissions for the following week.

  • Clients may opt to be responsible for delivering their samples to DSCF. Otherwise, DSCF will charge an additional flat rate delivery fee of:

Turnaround time

  • Results will be given on Friday of the same week of the submission.

  • Results may be given sooner for 96-well plate submissions.

Sample container formats accepted

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  • For primers:

    • 1.5-mL microtubes

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  • For samples:

    • 1.5-mL microtubes

    • 0.2-mL PCR tubes

    • 8- or 12-tube PCR strip with cap

    • 96-well PCR plate (ideally skirted) with pierceable aluminum sealing film

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Submission​

Note:

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  • We accept unpurified PCR products/plasmids for an additional fee
  • For Extract2Seq 16s rRNA gene Bacterial Identification, provide pure bacterial isolates in agar plate/broth tubes (for broth cultures, provide at least 2mL of sample.

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Important Reminders!

  • Do not exceed the specified concentration ranges.

  • Ensure that there are no leftover PCR reagents (dNTPs, primers) or protein contamination in your sample. As a guide, the A260/A280 ratio of DNA samples should be at ~1.8-2.0.

  • Ensure that there is enough primer provided for the ordered reactions and any possible re-runs.

  • If using TE buffer to dilute DNA samples, keep salt concentration at a minimum of 10 mM Tris containing 125 mM KCl or lower.

Sample Quality Requirements

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  • Please refer to the following agarose gel image below:

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Figure 1. Agarose gel image of DNA template/samples with good (A) and bad (B) quality

A

Note:

 

  • Samples should appear as a single, intense and sharp band on the gel.

  • Samples should not contain primer dimers.

B

© 2018 by DNA Sequencing Core Facility, Philippine Genome Center

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